CDS
| Accession Number | TCMCG009C20880 |
| gbkey | CDS |
| Protein Id | XP_030480280.1 |
| Location | complement(join(373299..373356,373824..373892,373997..374113,374186..374298,374418..374492,374596..375153,375903..376042,376133..376186,376279..376782,376882..377050,377133..377276,377368..377442,377649..377719,377818..377920,377997..378223,378732..378849,378939..379069,379458..379482)) |
| Gene | LOC115697424 |
| GeneID | 115697424 |
| Organism | Cannabis sativa |
Protein
| Length | 916aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA560384 |
| db_source | XM_030624420.1 |
| Definition | katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1 [Cannabis sativa] |
EGGNOG-MAPPER Annotation
| COG_category | Z |
| Description | May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko04812 [VIEW IN KEGG] |
| KEGG_ko |
ko:K18643
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0000151
[VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0031461 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0080008 [VIEW IN EMBL-EBI] GO:1902494 [VIEW IN EMBL-EBI] GO:1990234 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCGAAGCGTGGATATAAGCTACAGGAATTTTCAGCTCATTCAGGGAATGTAAATTGTCTAAGTATTGGAAAAAAGGGTTGTAGACATTTTGTGACAGGAGGGGATGATCAGAAAGTTAATGTTTGGCCAATTGGAAAATCAACTTCCTTAACTTGTCTAACTGGTCATACAAGCCCTGTTGAGTGTGTTGGTTTTGATTCAACAGAAGTTTTAGTCCTCGGTGGAGGTTCTAATGGTGTCATTAAGCAATGGGATTTAGAAGAATCAAAAATGGTTCGCACGCTTTCTGGACACAGATCCAACTGTACTGCTGTTGAATTTCATCCTTTTGGCGAGTTCTTTGCATCTGGTTCGATGGATACTAATTTAAGGGTATGGGATATTAGAAAGAAAGGGTGCATTCATACGTACAGGGGTCATACTAAAGGCGTAAGCACCATTAAATTCACTCCTGATGGGCGGTGGGTTGTTTCTGGTGGGCTTGATAATGTCGTAAAGGTGTGGGATCTTACTGCTGGAAAACTCTTGCACGAGTTTAAGTTCCACGAAGGAGCGGTTCAGTCCTTAGATTTTCATCCTCTGGAATTTCTTTTGGCCACAGGTTCAGCAGACAGAACTGTCAAATTCTGGGATTTGGAAACCTTTGAATTGATTGGATCAACCCGACCTGAGGCAACCGGAGTCCGTGTGATTGGCTTTCATCCAGATGGTAGGACTTTGTTTGCTGGACTAGAAGATAGTTTGAAGGTCTATTCGTGGGAGCCGGTTCTTTGTCATGACACTGTTGATATGGGATGGTCAACTCTTGGTGACTTGTGCATTCATGAAGGAAAACTGTTGGGATGCTCATACTACCAAAATTCTGTTGGAGTTTGGGTAGCGGATATATCGCATATTGAACCATATGGAGATGCTTCTCAAAATGATTGCACCGAGCCGAAGCTTAATCTTAAACTCCAAGAGAGCTCAGAGAGAGCGCCGACCATAGTAAGGACTTCAAGTTTGCGATCTCGGTCTCCTGATTATGAGACAAAAGAAATAAAGAACATATATGTGGACTCTGCTGGAGGAAAGCCTGTTGCTCGGCCGAAAATTGAGTCTTTAACTTCTCCAAAAGTGTCACCCCATTTGGATACAAAGGAAACGGATGATCTGGTGACAAAGAAGCCAAGTCAAGCAGTTAATAAATCTTTGTTAGTGCCAAGCGTTGTACCCCGTCAGAGTTCTGATGGGAAAGATTCGGCCAATTCTACGAGTGAATCTATTACCTTTTCGAGGACTAAACGTGGTATGTTACTTAGACCGGCTCATGTAAGAAGACCATCAAACAGCAGAAATGATGTGGAAAAGTTGTCGGTGTCATCTACTATCGAATCATCGCCTGTTAGCAAATTAATGAATAAATTAGATGGAGCAGCGGACTCGAACTGTGAAACAAAAACTGTTATAGAAGATAGAGTGGAAAAACATTCTGCTGCTATTGATTGTGTAACCGAAAAGCTTGACAAAGTTCTATCTCCTCCGAGGACACCTGCTAGTCAAGAAAAAGAAACAACTCAAACAAGTAATAAAGCCTTGAATTCCAGCAAAGATAAGCCTGTAAAATATGTCAATGGAGTTGCAGTTGTTCCGGGAAGAACTCGATCCCTTGTTGAAAGGTTTGAAAAAAGAGAGAAAGTTAATGGTAATGAAGATCAAGCTGGGGGTGTAGCTATCTGTGCAGTTCCTGAAATTGATAAAACACCTCCTCCTATGAAGCAGAAAGAAGAACCTCGAATTCCTACCAGAAATGAAGAACCTCATATTCTTACCTGGAATGAAGAGCCTCAAATTCCTACCAGGGTTGTTGAAAAACCTCAAACTCTTCCCACCAAGAATGAAGAACCTCAAATTCCTACAAGGATTGAAAAACCTCGAACTCCTCCCACCAAGAATGAAGAACCTCAAATTCCTACAAGGATTGAAAAACCTCGAACTCCTCCCACCAAGAATGAAGAGCCTCAATTTCCTACCAGGTGCGAAAGACCTCAAATTCCCACCAGAAATGTAAGACCTCAATTTCCCATCAGAAATGGAAAACCTCAAATTCCCACCATCAGGAATGAAAAGCCTCCAATTCCCACCAGGAATGAAGAACTTCAAGTTCAAATTCCGACCATTAGGAATGAAAAACCTCCAATTCCAACCGGGATTGAAGAACCTCAAATTCCCATTAGGAGTTTTGCCTCTGCAGATGTTAGGGATGGTACTGAAGACCTTATGCAAACTCATGATGTATTCTTGAGCACCCTTCGTTCTCGCTTGACAAAATTACAGGTGGTGCGGCATTTTTGGGAACGAAAAGATATTAAAGGTGCTATTAATGCCATGAGGAAGTTACCAGATCATTCTGTACAAGCAGATGTAATCAATGTTCTCATAGACAAAATGGATATCGTTACGCTTGATGTGTTCTCTTGCTTGCTTCCGGTGCTTATCGGTTTACTTGATAGCAAAACAGAAAGGCACACTACACTGTCAATGGAGATACTAATTAAGCTTGTAGCAGTGTTCGGTCCAGTGATAACCTCAGCCATTTCAACACCTAGAGCAGTCGGTGTTGATCTTCATGCAGAGCAAAGGGTGGAATGCTGCAAGCAATGTTCTAACCATCTGCAACAAGTCTTGAAGATTCTTCCATCACTTGTGAGGAAGGGTGGTTTGGTGGGCAGAAGTGCTCAGGAATTGAATCTAGTTCTTCAAGCATAA |
| Protein: MAKRGYKLQEFSAHSGNVNCLSIGKKGCRHFVTGGDDQKVNVWPIGKSTSLTCLTGHTSPVECVGFDSTEVLVLGGGSNGVIKQWDLEESKMVRTLSGHRSNCTAVEFHPFGEFFASGSMDTNLRVWDIRKKGCIHTYRGHTKGVSTIKFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGAVQSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRVIGFHPDGRTLFAGLEDSLKVYSWEPVLCHDTVDMGWSTLGDLCIHEGKLLGCSYYQNSVGVWVADISHIEPYGDASQNDCTEPKLNLKLQESSERAPTIVRTSSLRSRSPDYETKEIKNIYVDSAGGKPVARPKIESLTSPKVSPHLDTKETDDLVTKKPSQAVNKSLLVPSVVPRQSSDGKDSANSTSESITFSRTKRGMLLRPAHVRRPSNSRNDVEKLSVSSTIESSPVSKLMNKLDGAADSNCETKTVIEDRVEKHSAAIDCVTEKLDKVLSPPRTPASQEKETTQTSNKALNSSKDKPVKYVNGVAVVPGRTRSLVERFEKREKVNGNEDQAGGVAICAVPEIDKTPPPMKQKEEPRIPTRNEEPHILTWNEEPQIPTRVVEKPQTLPTKNEEPQIPTRIEKPRTPPTKNEEPQIPTRIEKPRTPPTKNEEPQFPTRCERPQIPTRNVRPQFPIRNGKPQIPTIRNEKPPIPTRNEELQVQIPTIRNEKPPIPTGIEEPQIPIRSFASADVRDGTEDLMQTHDVFLSTLRSRLTKLQVVRHFWERKDIKGAINAMRKLPDHSVQADVINVLIDKMDIVTLDVFSCLLPVLIGLLDSKTERHTTLSMEILIKLVAVFGPVITSAISTPRAVGVDLHAEQRVECCKQCSNHLQQVLKILPSLVRKGGLVGRSAQELNLVLQA |